Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEBPZ | DDX18 | ENSFCAP00000014621 | ENSFCAP00000000699 | CCAAT enhancer binding protein zeta. | RNA helicase. | 0.944 |
CEBPZ | ENSFCAP00000052252 | ENSFCAP00000014621 | ENSFCAP00000052252 | CCAAT enhancer binding protein zeta. | Uncharacterized protein. | 0.944 |
CEBPZ | GTPBP4 | ENSFCAP00000014621 | ENSFCAP00000023628 | CCAAT enhancer binding protein zeta. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.957 |
CEBPZ | NOC2L | ENSFCAP00000014621 | ENSFCAP00000003096 | CCAAT enhancer binding protein zeta. | NOC2 like nucleolar associated transcriptional repressor. | 0.995 |
CEBPZ | NOC3L | ENSFCAP00000014621 | ENSFCAP00000005817 | CCAAT enhancer binding protein zeta. | Nucleolar complex protein 3 homolog. | 0.927 |
CEBPZ | PDCD11 | ENSFCAP00000014621 | ENSFCAP00000002199 | CCAAT enhancer binding protein zeta. | Programmed cell death 11. | 0.990 |
CEBPZ | PES1 | ENSFCAP00000014621 | ENSFCAP00000030001 | CCAAT enhancer binding protein zeta. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.952 |
CEBPZ | PRRT4 | ENSFCAP00000014621 | ENSFCAP00000051817 | CCAAT enhancer binding protein zeta. | Proline rich transmembrane protein 4. | 0.966 |
CEBPZ | RBM34 | ENSFCAP00000014621 | ENSFCAP00000001715 | CCAAT enhancer binding protein zeta. | RNA binding motif protein 34. | 0.945 |
CEBPZ | RRP12 | ENSFCAP00000014621 | ENSFCAP00000036205 | CCAAT enhancer binding protein zeta. | Ribosomal RNA processing 12 homolog. | 0.937 |
DDX18 | CEBPZ | ENSFCAP00000000699 | ENSFCAP00000014621 | RNA helicase. | CCAAT enhancer binding protein zeta. | 0.944 |
DDX18 | ENSFCAP00000052252 | ENSFCAP00000000699 | ENSFCAP00000052252 | RNA helicase. | Uncharacterized protein. | 0.980 |
DDX18 | GTPBP4 | ENSFCAP00000000699 | ENSFCAP00000023628 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.993 |
DDX18 | NOC2L | ENSFCAP00000000699 | ENSFCAP00000003096 | RNA helicase. | NOC2 like nucleolar associated transcriptional repressor. | 0.992 |
DDX18 | NOC3L | ENSFCAP00000000699 | ENSFCAP00000005817 | RNA helicase. | Nucleolar complex protein 3 homolog. | 0.979 |
DDX18 | PDCD11 | ENSFCAP00000000699 | ENSFCAP00000002199 | RNA helicase. | Programmed cell death 11. | 0.930 |
DDX18 | PES1 | ENSFCAP00000000699 | ENSFCAP00000030001 | RNA helicase. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.994 |
DDX18 | PRRT4 | ENSFCAP00000000699 | ENSFCAP00000051817 | RNA helicase. | Proline rich transmembrane protein 4. | 0.941 |
DDX18 | RBM34 | ENSFCAP00000000699 | ENSFCAP00000001715 | RNA helicase. | RNA binding motif protein 34. | 0.865 |
DDX18 | RRP12 | ENSFCAP00000000699 | ENSFCAP00000036205 | RNA helicase. | Ribosomal RNA processing 12 homolog. | 0.889 |
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