STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIGA1Mitoguardin 1. (601 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2.
    
 
0.929
NEXN
Nexilin F-actin binding protein.
 
      0.719
FECH
Asparaginyl-tRNA synthetase.
      
 0.625
STAU2
Staufen double-stranded RNA binding protein 2.
      
 0.625
CDAN1
Codanin 1.
      
 0.612
JCHAIN
Joining chain of multimeric IgA and IgM.
      
 0.603
TRIM72
Tripartite motif containing 72.
    
 
 0.602
ATIC
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
      
 0.579
NSRP1
Nuclear speckle splicing regulatory protein 1.
      
 0.578
ERN1
Endoplasmic reticulum to nucleus signaling 1.
      
 0.558
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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