STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM59Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
IFT80
Intraflagellar transport 80.
 
  
 
 0.868
SMC4
Structural maintenance of chromosomes protein.
   
 
 0.822
ARL14
ADP ribosylation factor like GTPase 14; Belongs to the small GTPase superfamily. Arf family.
    
 0.817
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
    
 0.814
TRIM44
Tripartite motif containing 44.
    
 
 0.766
TRIM47
Tripartite motif containing 47.
      
 0.745
SKA2
Tripartite motif containing 37.
    
 
 0.736
ECSIT
ECSIT signalling integrator.
   
 
 0.682
KPNA4
Importin subunit alpha; Functions in nuclear protein import.
 
  
 
 0.661
RNF150
Ring finger protein 150.
     
 0.646
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.