STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA1H5orf49Chromosome A1 C5orf49 homolog. (147 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.962
C4orf47
Chromosome 4 open reading frame 47.
  
  
 0.830
IFT57
Intraflagellar transport 57.
      
 0.799
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.789
ARMC3
Armadillo repeat containing 3.
   
  
 0.767
CCDC170
Coiled-coil domain containing 170.
      
 0.637
LOC101086571
Uncharacterized protein.
      
 0.637
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.620
SPACA9
Sperm acrosome associated 9.
    
 
 0.611
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
 
 0.597
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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