Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DHX9DExH-box helicase 9. (1373 aa)    
Predicted Functional Partners:
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.991
DDX21
DExD-box helicase 21.
   
 0.962
EIF2AK2
Eukaryotic translation initiation factor 2 alpha kinase 2.
   
 0.954
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.954
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.945
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.934
DDX17
DEAD-box helicase 17; Belongs to the DEAD box helicase family.
   
 0.928
HNRNPC
RRM domain-containing protein.
   
 
 0.928
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.925
CDC40
Cell division cycle 40.
   
 0.922
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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