STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLCD4TLCD4-RWDD3 readthrough. (263 aa)    
Predicted Functional Partners:
SMIM3
Small integral membrane protein 3.
      
 0.817
NOCT
Nocturnin.
    
 
 0.807
METTL8
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.762
HEXIM2
HEXIM P-TEFb complex subunit 2.
      
 0.736
SBF2
SET binding factor 2.
      
 0.698
RASSF3
Ras association domain family member 3.
      
 0.687
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
    
 
 0.674
RGS7BP
Regulator of G protein signaling 7 binding protein.
      
 0.668
SBK1
Serine/threonine-protein kinase SBK1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
  
 0.655
OAZ1
Ornithine decarboxylase antizyme 1.
   
  
 0.643
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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