STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSRNP1Cysteine and serine rich nuclear protein 1. (574 aa)    
Predicted Functional Partners:
GADD45B
Growth arrest and DNA damage inducible beta.
   
  
 0.748
ZNF185
Zinc finger protein 185 with LIM domain.
      
 0.653
ADGRE3
Adhesion G protein-coupled receptor E3; Belongs to the G-protein coupled receptor 2 family.
      
 0.645
SLC39A9
Solute carrier family 39 member 9.
      
 0.597
UBFD1
Ubiquitin family domain containing 1.
      
 0.586
IER5L
Immediate early response 5 like.
   
  
 0.555
SLC22A13
Solute carrier family 22 member 13.
      
 0.542
SLC22A14
Solute carrier family 22 member 14.
      
 0.542
HPX
Amyloid beta precursor protein binding family B member 1.
      
 0.512
ARID5A
AT-rich interaction domain 5A.
   
  
 0.506
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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