Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AP1M2 | C1orf210 | ENSFCAP00000003925 | ENSFCAP00000060055 | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | Chromosome 1 open reading frame 210. | 0.469 |
AP1M2 | ELMO3 | ENSFCAP00000003925 | ENSFCAP00000048676 | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | Engulfment and cell motility 3. | 0.471 |
AP1M2 | KDF1 | ENSFCAP00000003925 | ENSFCAP00000018056 | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | Keratinocyte differentiation factor 1. | 0.542 |
AP1M2 | PRSS35 | ENSFCAP00000003925 | ENSFCAP00000003514 | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | Serine protease 35. | 0.449 |
AP1M2 | RAB25 | ENSFCAP00000003925 | ENSFCAP00000010928 | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | RAB25, member RAS oncogene family. | 0.475 |
ARHGEF16 | KDF1 | ENSFCAP00000012504 | ENSFCAP00000018056 | Rho guanine nucleotide exchange factor 16. | Keratinocyte differentiation factor 1. | 0.465 |
C1orf210 | AP1M2 | ENSFCAP00000060055 | ENSFCAP00000003925 | Chromosome 1 open reading frame 210. | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | 0.469 |
C1orf210 | ELMO3 | ENSFCAP00000060055 | ENSFCAP00000048676 | Chromosome 1 open reading frame 210. | Engulfment and cell motility 3. | 0.427 |
C1orf210 | KDF1 | ENSFCAP00000060055 | ENSFCAP00000018056 | Chromosome 1 open reading frame 210. | Keratinocyte differentiation factor 1. | 0.545 |
DHRS13 | KDF1 | ENSFCAP00000004854 | ENSFCAP00000018056 | Dehydrogenase/reductase 13. | Keratinocyte differentiation factor 1. | 0.455 |
DHRS13 | PRSS35 | ENSFCAP00000004854 | ENSFCAP00000003514 | Dehydrogenase/reductase 13. | Serine protease 35. | 0.550 |
ELMO3 | AP1M2 | ENSFCAP00000048676 | ENSFCAP00000003925 | Engulfment and cell motility 3. | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | 0.471 |
ELMO3 | C1orf210 | ENSFCAP00000048676 | ENSFCAP00000060055 | Engulfment and cell motility 3. | Chromosome 1 open reading frame 210. | 0.427 |
ELMO3 | KDF1 | ENSFCAP00000048676 | ENSFCAP00000018056 | Engulfment and cell motility 3. | Keratinocyte differentiation factor 1. | 0.475 |
FOXP1 | KDF1 | ENSFCAP00000043129 | ENSFCAP00000018056 | Forkhead box P1. | Keratinocyte differentiation factor 1. | 0.523 |
KDF1 | AP1M2 | ENSFCAP00000018056 | ENSFCAP00000003925 | Keratinocyte differentiation factor 1. | AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | 0.542 |
KDF1 | ARHGEF16 | ENSFCAP00000018056 | ENSFCAP00000012504 | Keratinocyte differentiation factor 1. | Rho guanine nucleotide exchange factor 16. | 0.465 |
KDF1 | C1orf210 | ENSFCAP00000018056 | ENSFCAP00000060055 | Keratinocyte differentiation factor 1. | Chromosome 1 open reading frame 210. | 0.545 |
KDF1 | DHRS13 | ENSFCAP00000018056 | ENSFCAP00000004854 | Keratinocyte differentiation factor 1. | Dehydrogenase/reductase 13. | 0.455 |
KDF1 | ELMO3 | ENSFCAP00000018056 | ENSFCAP00000048676 | Keratinocyte differentiation factor 1. | Engulfment and cell motility 3. | 0.475 |
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