STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF1Protein YIPF. (386 aa)    
Predicted Functional Partners:
YIPF4
Protein YIPF.
   
 
 0.823
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
  
 0.762
YIPF5
Protein YIPF.
   
 
 0.737
YIPF6
Protein YIPF.
   
 
 0.703
LOC105261090
Protein YIPF.
   
 
 0.703
STK32C
Serine/threonine kinase 32C; Belongs to the protein kinase superfamily.
   
  
 0.570
IFT80
Intraflagellar transport 80.
     
  0.540
IFT20
Intraflagellar transport 20.
     
  0.540
IFT140
Intraflagellar transport 140.
     
  0.540
IFT27
Intraflagellar transport 27.
     
  0.540
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.