STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBBP7RB binding protein 7, chromatin remodeling factor. (469 aa)    
Predicted Functional Partners:
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.996
MTA2
Metastasis associated 1 family member 2.
   
 0.993
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
   
 0.992
EED
Embryonic ectoderm development.
   
 0.991
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.989
RBBP4
RB binding protein 4, chromatin remodeling factor.
  
 
0.989
MBD3
Methyl-CpG binding domain protein 3.
   
 0.985
SAP30
Sin3A associated protein 30.
    
 0.985
ARID4B
AT-rich interaction domain 4B.
   
 0.981
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.981
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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