STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM108Transmembrane protein 108. (581 aa)    
Predicted Functional Partners:
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.716
SH3GL2
SH3 domain containing GRB2 like 2, endophilin A1.
      
 0.676
SYNDIG1
Synapse differentiation inducing 1.
      
 0.671
TBX6
T-box transcription factor 6.
      
 0.651
EPHA7
EPH receptor A7.
      
 0.524
EPHA10
EPH receptor A10.
      
 0.524
WDR64
WD repeat domain 64.
      
 0.491
CACHD1
Cache domain containing 1.
      
 0.477
UPK3B
Uroplakin 3B.
      
 0.457
CACNA1F
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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