STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28RAB28, member RAS oncogene family. (260 aa)    
Predicted Functional Partners:
DENND5A
DENN domain containing 5A.
     
 0.804
DENND1C
DENN domain containing 1C.
     
 0.798
DENND3
DENN domain containing 3.
    
 0.783
DENND5B
DENN domain containing 5B.
     
 0.777
ZNF653
Zinc finger protein 653.
    
 
 0.745
DENND1A
DENN domain containing 1A.
     
 0.733
ZNF692
Zinc finger protein 692.
    
 
 0.720
C8orf37
Chromosome 8 open reading frame 37.
      
 0.697
ZBTB39
Zinc finger and BTB domain containing 39.
    
 
 0.658
ZNF827
Zinc finger protein 827.
    
 
 0.638
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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