STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC47Coiled-coil domain containing 47. (483 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147.
    
 
 0.973
NCLN
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
    
 
 0.963
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.948
TMCO1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling; Belongs to the TMCO1 family.
    
 
 0.935
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.919
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.919
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.856
RPL13A
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.854
RPL7A
Ribosomal protein L7a.
   
   0.849
RPL4
Ribosomal protein L4.
   
   0.847
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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