STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPRIN1Cell cycle associated protein 1. (709 aa)    
Predicted Functional Partners:
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.981
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.921
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.867
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.807
FXR1
FMR1 autosomal homolog 1.
    
 
 0.803
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.795
CSDE1
Cold shock domain containing E1.
   
 
 0.739
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
      
 0.732
LSM14A
LSM14A mRNA processing body assembly factor.
   
 
 0.731
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.725
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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