STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD9Chromodomain helicase DNA binding protein 9. (2901 aa)    
Predicted Functional Partners:
PHF3
PHD finger protein 3.
   
 0.805
MED12L
Mediator complex subunit 12L.
   
 0.678
BDP1
SANT domain-containing protein.
   
 
 0.678
SAMD1
SAM domain-containing protein.
    
 0.642
ARID4B
AT-rich interaction domain 4B.
   
 0.626
SSRP1
Tankyrase 1 binding protein 1.
   
 
 0.619
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.617
ARID4A
AT-rich interaction domain 4A.
   
 0.602
TPST1
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
   
 0.588
PHIP
Pleckstrin homology domain interacting protein.
   
 0.586
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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