STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP290Centrosomal protein 290. (2481 aa)    
Predicted Functional Partners:
IQCB1
IQ motif containing B1.
    
 
 0.943
PLK1
Serine/threonine-protein kinase PLK.
   
 0.914
TMEM67
Transmembrane protein 67.
   
  
 0.910
NPHP4
Nephrocystin 4.
    
 
 0.866
NPHP1
Nephrocystin 1.
   
 0.862
TCTN1
Tectonic family member 1.
      
 0.824
ARL13B
ADP ribosylation factor like GTPase 13B.
   
 
 0.824
INVS
Inversin.
    
 0.802
PCM1
Pericentriolar material 1.
   
 
 0.791
CC2D2A
Coiled-coil and C2 domain containing 2A.
   
 
 0.787
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.