STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1LRAB GTPase activating protein 1 like. (815 aa)    
Predicted Functional Partners:
RAB6B
RAB6B, member RAS oncogene family.
    
 0.628
RAB6A
RAB6A, member RAS oncogene family.
    
 0.628
RABGEF1
Uncharacterized protein.
   
  0.614
RAB36
RAB36, member RAS oncogene family.
    
 0.561
IQGAP3
IQ motif containing GTPase activating protein 3.
      
 0.555
TBCC
Tubulin folding cofactor C.
      
 0.552
RC3H2
Ring finger and CCCH-type domains 2.
   
  
 0.522
RAB22A
RAB22A, member RAS oncogene family.
    
 0.511
ACAP1
ArfGAP with coiled-coil, ankyrin repeat and PH domains 1.
    
 
 0.508
ALS2CL
ALS2 C-terminal like.
      
 0.501
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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