STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1BRasGEF domain family member 1B. (652 aa)    
Predicted Functional Partners:
HAUS8
HAUS augmin like complex subunit 8.
      
 0.740
SLC26A3
Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.690
ARHGAP5
Rho GTPase activating protein 5.
      
 0.670
ARHGAP12
Rho GTPase activating protein 12.
   
  
 0.651
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
  
 0.626
RABGEF1
Uncharacterized protein.
      
 0.623
DST
Dystonin.
      
 0.602
ARFGEF3
ARFGEF family member 3.
   
  
 0.561
EPB41L4B
Erythrocyte membrane protein band 4.1 like 4B.
      
 0.546
PHACTR2
Phosphatase and actin regulator.
   
  
 0.544
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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