STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE2Synapse defective Rho GTPase homolog 2. (1379 aa)    
Predicted Functional Partners:
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.869
CBR3
Carbonyl reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.811
RHOG
Ras homolog family member G.
   
 0.770
CHRM5
Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.
   
  
 0.746
LRP12
LDL receptor related protein 12.
      
 0.658
RHOF
Ras homolog family member F, filopodia associated.
   
 0.656
GCM1
Glial cells missing transcription factor 1.
      
 0.637
CNKSR1
Connector enhancer of kinase suppressor of Ras 1.
   
  
 0.636
CRK
CRK proto-oncogene, adaptor protein.
      
 0.634
ENSFCAP00000060547
SSD domain-containing protein.
      
 0.606
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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