STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1Chromodomain helicase DNA binding protein 1. (1655 aa)    
Predicted Functional Partners:
INO80C
INO80 complex subunit C.
    
 0.785
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.761
CDC73
Cell division cycle 73.
   
 
 0.717
RANBP2
RAN binding protein 2.
   
  0.687
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.684
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.680
PTPN1
Tyrosine-protein phosphatase non-receptor type.
    
 
 0.672
PDLIM2
PDZ and LIM domain 2.
      
 0.668
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.663
WDR5
WD repeat domain 5.
    
 0.638
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.