STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCR8SMCR8-C9orf72 complex subunit. (938 aa)    
Predicted Functional Partners:
WDR41
WD repeat domain 41.
    
 0.999
CD4H9orf72
Chromosome D4 C9orf72 homolog.
    
 0.997
RAB39B
RAB39B, member RAS oncogene family.
    
 0.961
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.948
RAB8A
RAB8A, member RAS oncogene family.
    
 0.946
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.922
TBK1
TANK binding kinase 1.
   
 0.920
TANK
TRAF family member associated NFKB activator.
     
 0.911
FNIP1
Folliculin interacting protein 1.
    
 
 0.803
FLCN
Uncharacterized protein.
      
 0.787
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.