M3XFB8_FELCA protein (Felis catus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M3XFB8_FELCA

Uncharacterized protein. (91 aa)

Predicted Functional Partners:

RPL13A

0.996

RPL23

0.996

RPL8

0.996

RPL19

0.996

RPL7A

0.996

RPL6

0.994

RPL4

0.994

RPL13

0.993

RPL3

0.992

RPS16

0.992

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M3XFB8_FELCA	RPL13	ENSFCAP00000025328	ENSFCAP00000062065	Uncharacterized protein.	Uncharacterized protein.	0.993
M3XFB8_FELCA	RPL13A	ENSFCAP00000025328	ENSFCAP00000008520	Uncharacterized protein.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.996
M3XFB8_FELCA	RPL19	ENSFCAP00000025328	ENSFCAP00000028930	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.996
M3XFB8_FELCA	RPL23	ENSFCAP00000025328	ENSFCAP00000013451	Uncharacterized protein.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.996
M3XFB8_FELCA	RPL3	ENSFCAP00000025328	ENSFCAP00000005405	Uncharacterized protein.	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.992
M3XFB8_FELCA	RPL4	ENSFCAP00000025328	ENSFCAP00000011405	Uncharacterized protein.	Ribosomal protein L4.	0.994
M3XFB8_FELCA	RPL6	ENSFCAP00000025328	ENSFCAP00000006368	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.994
M3XFB8_FELCA	RPL7A	ENSFCAP00000025328	ENSFCAP00000044690	Uncharacterized protein.	Ribosomal protein L7a.	0.996
M3XFB8_FELCA	RPL8	ENSFCAP00000025328	ENSFCAP00000017067	Uncharacterized protein.	Ribosomal protein L8.	0.996
M3XFB8_FELCA	RPS16	ENSFCAP00000025328	ENSFCAP00000009979	Uncharacterized protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.992
RPL13	M3XFB8_FELCA	ENSFCAP00000062065	ENSFCAP00000025328	Uncharacterized protein.	Uncharacterized protein.	0.993
RPL13	RPL13A	ENSFCAP00000062065	ENSFCAP00000008520	Uncharacterized protein.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
RPL13	RPL19	ENSFCAP00000062065	ENSFCAP00000028930	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
RPL13	RPL23	ENSFCAP00000062065	ENSFCAP00000013451	Uncharacterized protein.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
RPL13	RPL3	ENSFCAP00000062065	ENSFCAP00000005405	Uncharacterized protein.	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.999
RPL13	RPL4	ENSFCAP00000062065	ENSFCAP00000011405	Uncharacterized protein.	Ribosomal protein L4.	0.999
RPL13	RPL6	ENSFCAP00000062065	ENSFCAP00000006368	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
RPL13	RPL7A	ENSFCAP00000062065	ENSFCAP00000044690	Uncharacterized protein.	Ribosomal protein L7a.	0.999
RPL13	RPL8	ENSFCAP00000062065	ENSFCAP00000017067	Uncharacterized protein.	Ribosomal protein L8.	0.999
RPL13	RPS16	ENSFCAP00000062065	ENSFCAP00000009979	Uncharacterized protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.998