STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain 9; Belongs to the peptidase C2 family. (690 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
   
 0.734
CAPNS1
Calpain small subunit 1.
   
0.707
TCAP
Titin-cap.
   
  
 0.636
ENSFCAP00000060955
SH3 domain-containing protein.
   
  
 0.577
ITSN2
Intersectin 2.
   
 
  0.560
FLNC
Filamin C.
   
 
 0.481
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.476
TRIM71
Tripartite motif containing 71.
     
 0.468
MYH6
Myosin heavy chain 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.461
DYSF
Dysferlin.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.