Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DEPDC5 | JMJD8 | ENSFCAP00000041212 | ENSFCAP00000037890 | DEP domain containing 5. | WD repeat domain 24. | 0.999 |
DEPDC5 | KPTN | ENSFCAP00000041212 | ENSFCAP00000005715 | DEP domain containing 5. | Kaptin, actin binding protein. | 0.989 |
DEPDC5 | NPRL2 | ENSFCAP00000041212 | ENSFCAP00000001851 | DEP domain containing 5. | NPR2 like, GATOR1 complex subunit. | 0.999 |
DEPDC5 | SZT2 | ENSFCAP00000041212 | ENSFCAP00000045912 | DEP domain containing 5. | SZT2 subunit of KICSTOR complex. | 0.984 |
DEPDC5 | WDR59 | ENSFCAP00000041212 | ENSFCAP00000035726 | DEP domain containing 5. | WD repeat domain 59. | 0.999 |
DEPDC5 | XRCC4 | ENSFCAP00000041212 | ENSFCAP00000026852 | DEP domain containing 5. | X-ray repair cross complementing 4. | 0.778 |
JMJD8 | DEPDC5 | ENSFCAP00000037890 | ENSFCAP00000041212 | WD repeat domain 24. | DEP domain containing 5. | 0.999 |
JMJD8 | KPTN | ENSFCAP00000037890 | ENSFCAP00000005715 | WD repeat domain 24. | Kaptin, actin binding protein. | 0.987 |
JMJD8 | NPRL2 | ENSFCAP00000037890 | ENSFCAP00000001851 | WD repeat domain 24. | NPR2 like, GATOR1 complex subunit. | 0.999 |
JMJD8 | SZT2 | ENSFCAP00000037890 | ENSFCAP00000045912 | WD repeat domain 24. | SZT2 subunit of KICSTOR complex. | 0.983 |
JMJD8 | WDR59 | ENSFCAP00000037890 | ENSFCAP00000035726 | WD repeat domain 24. | WD repeat domain 59. | 0.999 |
JMJD8 | XRCC4 | ENSFCAP00000037890 | ENSFCAP00000026852 | WD repeat domain 24. | X-ray repair cross complementing 4. | 0.783 |
KPTN | DEPDC5 | ENSFCAP00000005715 | ENSFCAP00000041212 | Kaptin, actin binding protein. | DEP domain containing 5. | 0.989 |
KPTN | JMJD8 | ENSFCAP00000005715 | ENSFCAP00000037890 | Kaptin, actin binding protein. | WD repeat domain 24. | 0.987 |
KPTN | NPRL2 | ENSFCAP00000005715 | ENSFCAP00000001851 | Kaptin, actin binding protein. | NPR2 like, GATOR1 complex subunit. | 0.986 |
KPTN | SZT2 | ENSFCAP00000005715 | ENSFCAP00000045912 | Kaptin, actin binding protein. | SZT2 subunit of KICSTOR complex. | 0.995 |
KPTN | WDR59 | ENSFCAP00000005715 | ENSFCAP00000035726 | Kaptin, actin binding protein. | WD repeat domain 59. | 0.985 |
KPTN | XRCC4 | ENSFCAP00000005715 | ENSFCAP00000026852 | Kaptin, actin binding protein. | X-ray repair cross complementing 4. | 0.839 |
LIG4 | XRCC4 | ENSFCAP00000023705 | ENSFCAP00000026852 | DNA ligase. | X-ray repair cross complementing 4. | 0.944 |
LIG4 | XRCC6 | ENSFCAP00000023705 | ENSFCAP00000015907 | DNA ligase. | X-ray repair cross complementing 6. | 0.991 |
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