STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGLN3Transgelin 3. (228 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.831
MYL9
Myosin light chain 9.
   
 0.677
MYL12A
Myosin light chain 12A.
   
 0.677
HPCAL4
Hippocalcin like 4.
   
 0.664
TFCP2
Transcription factor CP2.
   
  
 0.637
LSAMP
Limbic system associated membrane protein.
   
  
 0.585
MARF1
Myosin heavy chain 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.574
WDR1
WD repeat domain 1.
   
 
 0.564
EFHB
EF-hand domain family member B.
   
   0.552
PACRG
Parkin coregulated.
    
 
 0.542
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.