STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAP4Cytoskeleton associated protein 4. (586 aa)    
Predicted Functional Partners:
ZDHHC2
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
 0.928
TMEM214
Transmembrane protein 214.
    
 
 0.765
LOC101101085
C-type lectin domain-containing protein.
    
 0.761
RHBDD1
Rhomboid domain containing 1.
    
 
 0.631
TMX4
Thioredoxin related transmembrane protein 4.
   
 
 0.612
POPDC2
Popeye domain containing 2.
      
 0.587
ZDHHC15
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
 0.570
ZDHHC20
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
 0.570
RND3
Rho family GTPase 3.
   
 0.562
RND2
Rho family GTPase 2.
   
 
  0.553
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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