STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYSMD4LysM domain containing 4. (298 aa)    
Predicted Functional Partners:
FAM174B
Family with sequence similarity 174 member B.
      
 0.921
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.772
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
      
 0.455
MFSD3
Major facilitator superfamily domain containing 3.
      
 0.455
RERG
RAS like estrogen regulated growth inhibitor.
      
 0.455
RPL9
Ribosomal protein L9.
      
 0.443
ENSFCAP00000056142
Ribosomal_L6 domain-containing protein.
      
 0.443
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
      
 0.420
ENSFCAP00000052821
Uncharacterized protein.
      
 0.420
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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