STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI1ORC ubiquitin ligase 1. (717 aa)    
Predicted Functional Partners:
ORC3
Origin recognition complex subunit 3.
   
 
 0.689
ZNF184
Zinc finger protein 184.
      
 0.670
ORC5
Origin recognition complex subunit 5.
    
 
 0.639
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 
 0.599
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
  
 0.514
RANGAP1
Ran GTPase activating protein 1.
      
 0.485
RBFOX2
RNA binding fox-1 homolog 2.
      
 0.450
RIMKLA
Ribosomal modification protein rimK like family member A.
      
 0.437
SSRP1
Tankyrase 1 binding protein 1.
    
 
 0.424
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 
 0.420
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.