STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM4BRNA binding motif protein 4B. (359 aa)    
Predicted Functional Partners:
MAATS1
CFAP91 domain-containing protein.
    
 
 0.634
OVCA2
OVCA2 serine hydrolase domain containing.
      
 0.627
EIF2A
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
   
    0.551
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.529
MED27
Mediator complex subunit 27.
      
 0.529
SPSB1
SplA/ryanodine receptor domain and SOCS box containing 1.
      
 0.521
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
      
 0.516
FAM53B
Family with sequence similarity 53 member B.
      
 0.481
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 
 0.468
BCO1
Beta-carotene oxygenase 1.
   
  
 0.464
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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