STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFCAP00000036754Pinin_SDK_N domain-containing protein. (124 aa)    
Predicted Functional Partners:
PNN
Uncharacterized protein.
 
   
  0.989
SAP18
Sin3A associated protein 18.
    
 0.979
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.869
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.813
ENSFCAP00000035151
Uncharacterized protein.
    
 0.799
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.792
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 0.735
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.681
PABPN1
Poly(A) binding protein nuclear 1.
   
 0.677
PRPF4B
Pre-mRNA processing factor 4B.
   
 0.675
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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