STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRX1Paired related homeobox 1. (251 aa)    
Predicted Functional Partners:
AGMO
Alkylglycerol monooxygenase.
    
 
 0.592
TWIST1
Twist family bHLH transcription factor 1.
   
  
 0.466
TWIST2
Twist family bHLH transcription factor 2.
   
  
 0.466
FOXN4
Forkhead box N4.
   
 
 0.427
SOST
Sclerostin.
   
 
 0.423
COL1A1
Collagen type I alpha 1 chain.
   
 
 0.420
LEPR
Leptin receptor.
      
 0.410
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.