ZSCAN29 protein (Felis catus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZSCAN29

Zinc finger and SCAN domain containing 29. (852 aa)

Predicted Functional Partners:

KNDC1

0.800

KCTD6

0.630

PDAP1

0.618

ENOPH1

0.596

NPAS4

0.559

RBM7

0.545

GPR83

0.543

MED11

0.540

VOPP1

0.539

ATP6V1D

0.527

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V1D	ENOPH1	ENSFCAP00000010292	ENSFCAP00000047757	ATPase H+ transporting V1 subunit D.	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	0.412
ATP6V1D	ZSCAN29	ENSFCAP00000010292	ENSFCAP00000037355	ATPase H+ transporting V1 subunit D.	Zinc finger and SCAN domain containing 29.	0.527
ENOPH1	ATP6V1D	ENSFCAP00000047757	ENSFCAP00000010292	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	ATPase H+ transporting V1 subunit D.	0.412
ENOPH1	MED11	ENSFCAP00000047757	ENSFCAP00000027580	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.489
ENOPH1	VOPP1	ENSFCAP00000047757	ENSFCAP00000026182	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	VOPP1 WW domain binding protein.	0.489
ENOPH1	ZSCAN29	ENSFCAP00000047757	ENSFCAP00000037355	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	Zinc finger and SCAN domain containing 29.	0.596
GPR83	ZSCAN29	ENSFCAP00000026790	ENSFCAP00000037355	G protein-coupled receptor 83; Belongs to the G-protein coupled receptor 1 family.	Zinc finger and SCAN domain containing 29.	0.543
KCTD6	PDAP1	ENSFCAP00000017750	ENSFCAP00000013976	Potassium channel tetramerization domain containing 6.	PDGFA associated protein 1.	0.621
KCTD6	RBM7	ENSFCAP00000017750	ENSFCAP00000050196	Potassium channel tetramerization domain containing 6.	RRM domain-containing protein.	0.612
KCTD6	ZSCAN29	ENSFCAP00000017750	ENSFCAP00000037355	Potassium channel tetramerization domain containing 6.	Zinc finger and SCAN domain containing 29.	0.630
KNDC1	ZSCAN29	ENSFCAP00000057858	ENSFCAP00000037355	Kinase non-catalytic C-lobe domain containing 1.	Zinc finger and SCAN domain containing 29.	0.800
MED11	ENOPH1	ENSFCAP00000027580	ENSFCAP00000047757	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	0.489
MED11	VOPP1	ENSFCAP00000027580	ENSFCAP00000026182	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	VOPP1 WW domain binding protein.	0.455
MED11	ZSCAN29	ENSFCAP00000027580	ENSFCAP00000037355	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Zinc finger and SCAN domain containing 29.	0.540
NPAS4	ZSCAN29	ENSFCAP00000008622	ENSFCAP00000037355	Neuronal PAS domain protein 4.	Zinc finger and SCAN domain containing 29.	0.559
PDAP1	KCTD6	ENSFCAP00000013976	ENSFCAP00000017750	PDGFA associated protein 1.	Potassium channel tetramerization domain containing 6.	0.621
PDAP1	RBM7	ENSFCAP00000013976	ENSFCAP00000050196	PDGFA associated protein 1.	RRM domain-containing protein.	0.546
PDAP1	ZSCAN29	ENSFCAP00000013976	ENSFCAP00000037355	PDGFA associated protein 1.	Zinc finger and SCAN domain containing 29.	0.618
RBM7	KCTD6	ENSFCAP00000050196	ENSFCAP00000017750	RRM domain-containing protein.	Potassium channel tetramerization domain containing 6.	0.612
RBM7	PDAP1	ENSFCAP00000050196	ENSFCAP00000013976	RRM domain-containing protein.	PDGFA associated protein 1.	0.546