STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYDGFMyeloid derived growth factor. (173 aa)    
Predicted Functional Partners:
COPE
Ceramide synthase 1.
   
  
 0.752
SSR4
Signal sequence receptor subunit 4.
   
  
 0.644
CALR
Calreticulin.
   
   0.494
SMIM7
Small integral membrane protein 7.
   
  
 0.481
SDF2L1
Stromal cell derived factor 2 like 1.
   
  
 0.466
SRPX2
Sushi repeat containing protein X-linked 2.
      
 0.455
UFL1
UFM1 specific ligase 1.
      
 0.455
SPATA5L1
Spermatogenesis associated 5 like 1.
      
 0.455
P4HB
Protein disulfide-isomerase.
   
  
 0.451
ANKRD13C
Ankyrin repeat domain 13C.
      
 0.451
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.