STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A1Protein tyrosine phosphatase 4A1. (173 aa)    
Predicted Functional Partners:
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.741
CARHSP1
Calcium regulated heat stable protein 1.
      
 0.670
LITAFD
LITAF domain containing.
   
  
 0.650
RCBTB1
RCC1 and BTB domain containing protein 1.
      
 0.640
KCTD5
Potassium channel tetramerization domain containing 5.
      
 0.632
GCNA
SprT-like domain-containing protein.
      
 0.618
PHF3
PHD finger protein 3.
 
    
 0.615
NUBPL
Nucleotide binding protein like.
      
 0.611
LITAF
Uncharacterized protein.
   
  
 0.592
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
   
  
 0.590
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.