STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH1Atonal bHLH transcription factor 1. (356 aa)    
Predicted Functional Partners:
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.893
GFI1
Growth factor independent 1 transcriptional repressor.
    
 
 0.844
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.764
POU4F1
POU domain protein.
      
 0.721
DBX1
Developing brain homeobox 1.
   
  
 0.714
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 
 0.703
CDH23
Cadherin related 23.
      
 0.662
TCF12
Transcription factor 12.
    
 
 0.615
TCF3
Transcription factor 3.
    
 
 0.615
TCF4
Transcription factor 4.
    
 
 0.615
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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