STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf92Chromosome 16 open reading frame 92. (130 aa)    
Predicted Functional Partners:
DOC2A
Double C2 domain alpha.
      
 0.572
TLCD3B
TLC domain ceramide synthase 3B.
      
 0.568
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.565
PDZD9
PDZ domain containing 9.
      
 0.523
YPEL3
Yippee like 3.
      
 0.523
SEZ6L2
Seizure related 6 homolog like 2.
      
 0.493
KCTD13
Potassium channel tetramerization domain containing 13.
      
 0.455
ENSFCAP00000051698
Uncharacterized protein.
      
 0.455
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.452
FAM126A
Family with sequence similarity 126 member A.
      
 0.442
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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