STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDProtein tyrosine phosphatase receptor type D. (1912 aa)    
Predicted Functional Partners:
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
0.985
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.983
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
   
 0.961
SLITRK1
SLIT and NTRK like family member 1.
    
 0.912
PPFIA3
PTPRF interacting protein alpha 3.
    
 0.874
SLITRK2
Uncharacterized protein.
    
 0.852
ENSFCAP00000060568
Uncharacterized protein.
    
 0.852
SLITRK3
SLIT and NTRK like family member 3.
   
 0.836
NTRK3
Tyrosine-protein kinase receptor.
   
 0.795
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
   
 0.787
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.