STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFD1OFD1 centriole and centriolar satellite protein. (339 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
   
 0.937
OFD1-2
LisH domain-containing protein.
 
     0.925
SDCCAG8
Serologically defined colon cancer antigen 8.
    
 
 0.838
PCM1
Pericentriolar material 1.
   
 
 0.783
RPGR
Uncharacterized protein.
   
 0.758
GPM6B
Glycoprotein M6B.
      
 0.733
KIAA0753
KIAA0753.
    
 
 0.717
SCLT1
Sodium channel and clathrin linker 1.
      
 0.671
CCDC14
Coiled-coil domain containing 14.
   
 
 0.657
BBS4
Bardet-Biedl syndrome 4.
    
 
 0.657
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.