STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLCD3ATLC domain containing 3A. (258 aa)    
Predicted Functional Partners:
MFSD12
Major facilitator superfamily domain containing 12.
   
  
 0.769
MREG
Melanoregulin.
      
 0.641
PPP1R16A
Protein phosphatase 1 regulatory subunit 16A.
    
 
 0.585
PPP1R16B
Protein phosphatase 1 regulatory subunit 16B.
    
 
 0.585
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.558
PDLIM1
PDZ and LIM domain 1.
      
 0.546
LRRIQ1
Leucine rich repeats and IQ motif containing 1.
    
 
 0.482
MRPL51
Mitochondrial ribosomal protein L51.
      
 0.455
DND1
Histidyl-tRNA synthetase.
      
 0.444
LENG1
Leukocyte receptor cluster member 1.
      
 0.416
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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