STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK13Cyclin dependent kinase 13. (1514 aa)    
Predicted Functional Partners:
CCNK
Cyclin K; Belongs to the cyclin family.
   
 0.998
SUPT5H
Transcription elongation factor SPT5.
    
 0.909
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.908
CHRNB1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.901
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.877
NELFE
Negative elongation factor complex member E.
    
 0.875
CDC73
Cell division cycle 73.
   
 0.872
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.862
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.834
CCNT1
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.830
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.