STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA3Shisa family member 3. (334 aa)    
Predicted Functional Partners:
RGS22
Regulator of G protein signaling 22.
      
 0.753
GAS2L2
Growth arrest specific 2 like 2.
      
 0.695
CFAP299
Cilia and flagella associated protein 299.
      
 0.677
BEND4
BEN domain containing 4.
      
 0.675
PDCL2
Phosducin like 2.
      
 0.674
LRRC66
Uncharacterized protein.
      
 0.674
YIPF7
Protein YIPF.
      
 0.666
TMEM33
Transmembrane protein 33.
      
 0.652
HTATSF1
HIV-1 Tat specific factor 1.
      
 0.635
NFXL1
Nuclear transcription factor, X-box binding like 1.
      
 0.624
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.