STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox C13. (329 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
   
 
 0.654
CALCOCO1
Calcium binding and coiled-coil domain 1.
      
 0.513
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
      
 0.483
FOXN4
Forkhead box N4.
   
 
 0.474
PADI3
Peptidyl arginine deiminase 3.
      
 0.464
DNAJC24
DnaJ heat shock protein family (Hsp40) member C24.
      
 0.455
PPP1R36
Protein phosphatase 1 regulatory subunit 36.
      
 0.455
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.455
MSX2
Msh homeobox 2.
   
  
0.447
TCHHL1
Trichohyalin like 1.
      
 0.426
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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