STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA3Homeobox A3. (441 aa)    
Predicted Functional Partners:
PAX1
Paired box 1.
    
 
 0.758
FOXN1
Forkhead box N1.
    
 0.746
HOXA5
Homeobox A5.
   
  
0.746
HOXA4
Homeobox A4.
   
  
0.725
HOXA2
Homeobox A2.
   
  
0.690
FAM216B
Family with sequence similarity 216 member B.
      
 0.661
PAX9
Paired box 9.
    
 
 0.611
HOXA7
Homeobox A7.
   
  
0.604
METAP1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
      
 0.590
EIF2D-2
Pre-PUA domain-containing protein.
      
 0.588
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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