STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFCAP00000046287RRM domain-containing protein. (139 aa)    
Predicted Functional Partners:
ARHGAP27
Rho GTPase activating protein 27.
      
 0.722
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.629
FBXL20
F-box domain-containing protein.
      
 0.473
CTIF
Cap binding complex dependent translation initiation factor.
   
  
 0.468
KHNYN
KH and NYN domain containing.
      
 0.455
ASB8
Ankyrin repeat and SOCS box containing 8.
      
 0.455
CDC40
Cell division cycle 40.
      
 0.455
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.455
BCAS3
BCAS3 microtubule associated cell migration factor.
      
 0.455
UTP18
UTP18 small subunit processome component.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.