STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARF1Scavenger receptor class F member 1. (830 aa)    
Predicted Functional Partners:
ATP8B2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.536
AVIL
Advillin.
    
 
 0.526
CD300LF
CD300 molecule like family member f.
    
 0.497
NTN5
Netrin 5.
      
 0.483
INO80D
INO80 complex subunit D.
      
 0.459
RAD54L2
RAD54 like 2.
   
  
 0.457
ECRG4
ECRG4 augurin precursor.
      
 0.455
CD36
CD36 molecule; Belongs to the CD36 family.
      
 0.455
SFTPD
Surfactant protein D.
   
  
 0.452
SLC30A5
Solute carrier family 30 member 5.
   
  
 0.449
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.