STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBP5Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (149 aa)    
Predicted Functional Partners:
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.747
UPK2
Uroplakin 2.
    
 
 0.744
UPK3B
Uroplakin 3B.
      
 0.702
UPK1A
Uroplakin 1A; Belongs to the tetraspanin (TM4SF) family.
      
 0.672
RDH5
Retinol dehydrogenase 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.653
ENPEP
Aminopeptidase.
      
 0.616
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 
 0.582
SLC12A1
Solute carrier family 12 member 1.
   
  
 0.581
PRMT2
Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.578
STRA6
Stimulated by retinoic acid 6.
     
 0.548
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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