STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIX6SIX homeobox 6. (266 aa)    
Predicted Functional Partners:
LRRC9
Leucine rich repeat containing 9.
    
 
 0.655
PAX6
Paired box 6.
   
 
 0.596
OTX2
Orthodenticle homeobox 2.
   
 
 0.594
HESX1
HESX homeobox 1.
    
 
 0.523
TMEM126A
Uncharacterized protein.
      
 0.501
NAV2
Neuron navigator 2.
      
 0.501
TMCO1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling; Belongs to the TMCO1 family.
      
 0.485
ENSFCAP00000060693
TF_Otx domain-containing protein.
   
 
 0.483
OTX1
Orthodenticle homeobox 1.
   
 
 0.481
GBX2
Gastrulation brain homeobox 2.
    
 
 0.477
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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