PCP4L1 protein (Felis catus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PCP4L1

Purkinje cell protein 4 like 1. (68 aa)

Predicted Functional Partners:

NIM1K

0.783

TMEM192

0.775

BPIFB3

0.750

GPR26

0.717

PPP2R2B

0.660

SLC41A3

0.638

PLA2G4D

0.627

MYBPC2

0.617

NDUFS2

0.559

TTC13

0.547

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BPIFB3	PCP4L1	ENSFCAP00000014084	ENSFCAP00000050199	BPI fold containing family B member 3.	Purkinje cell protein 4 like 1.	0.750
BPIFB3	PPP2R2B	ENSFCAP00000014084	ENSFCAP00000030033	BPI fold containing family B member 3.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.570
BPIFB3	TMEM192	ENSFCAP00000014084	ENSFCAP00000032108	BPI fold containing family B member 3.	Transmembrane protein 192.	0.756
BPIFB3	TTC13	ENSFCAP00000014084	ENSFCAP00000038505	BPI fold containing family B member 3.	Tetratricopeptide repeat domain 13.	0.555
GPR26	MYBPC2	ENSFCAP00000041717	ENSFCAP00000000303	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Myosin binding protein C, fast type.	0.604
GPR26	NIM1K	ENSFCAP00000041717	ENSFCAP00000011119	G_PROTEIN_RECEP_F1_2 domain-containing protein.	NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.779
GPR26	PCP4L1	ENSFCAP00000041717	ENSFCAP00000050199	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Purkinje cell protein 4 like 1.	0.717
GPR26	PLA2G4D	ENSFCAP00000041717	ENSFCAP00000026048	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Phospholipase A2.	0.625
MYBPC2	GPR26	ENSFCAP00000000303	ENSFCAP00000041717	Myosin binding protein C, fast type.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.604
MYBPC2	NIM1K	ENSFCAP00000000303	ENSFCAP00000011119	Myosin binding protein C, fast type.	NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.715
MYBPC2	PCP4L1	ENSFCAP00000000303	ENSFCAP00000050199	Myosin binding protein C, fast type.	Purkinje cell protein 4 like 1.	0.617
MYBPC2	PLA2G4D	ENSFCAP00000000303	ENSFCAP00000026048	Myosin binding protein C, fast type.	Phospholipase A2.	0.455
NDUFS2	PCP4L1	ENSFCAP00000029379	ENSFCAP00000050199	NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.	Purkinje cell protein 4 like 1.	0.559
NIM1K	GPR26	ENSFCAP00000011119	ENSFCAP00000041717	NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.779
NIM1K	MYBPC2	ENSFCAP00000011119	ENSFCAP00000000303	NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Myosin binding protein C, fast type.	0.715
NIM1K	PCP4L1	ENSFCAP00000011119	ENSFCAP00000050199	NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Purkinje cell protein 4 like 1.	0.783
NIM1K	PLA2G4D	ENSFCAP00000011119	ENSFCAP00000026048	NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Phospholipase A2.	0.743
PCP4L1	BPIFB3	ENSFCAP00000050199	ENSFCAP00000014084	Purkinje cell protein 4 like 1.	BPI fold containing family B member 3.	0.750
PCP4L1	GPR26	ENSFCAP00000050199	ENSFCAP00000041717	Purkinje cell protein 4 like 1.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.717
PCP4L1	MYBPC2	ENSFCAP00000050199	ENSFCAP00000000303	Purkinje cell protein 4 like 1.	Myosin binding protein C, fast type.	0.617