STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOFOtoferlin. (1998 aa)    
Predicted Functional Partners:
CTBP2
C-terminal binding protein 2.
     
 0.831
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.813
SLC17A8
Solute carrier family 17 member 8.
     
 0.710
TMC1
Transmembrane channel-like protein.
   
 
 0.669
BSN
Bassoon presynaptic cytomatrix protein.
   
 
 0.668
OTOG
Otogelin.
    
 
 0.658
PJVK
Pejvakin.
      
 0.654
MYO15A
Uncharacterized protein.
   
  
 0.645
SYT1
Synaptotagmin 1.
   
  
 0.639
CDH23
Cadherin related 23.
      
 0.612
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.