STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111560444Ig-like domain-containing protein; Belongs to the MHC class II family. (250 aa)    
Predicted Functional Partners:
CD4
CD4 molecule.
   
 0.966
LOC101082906
Ig-like domain-containing protein.
   
0.941
LOC111559549
Ig-like domain-containing protein.
    
  0.930
LOC101084108
Ig-like domain-containing protein; Belongs to the MHC class II family.
  
0.929
LOC111560443
Ig-like domain-containing protein; Belongs to the MHC class II family.
  
0.929
LOC111560440
Ig-like domain-containing protein.
   
0.922
LOC101090265
Ig-like domain-containing protein.
   
0.919
LOC111556173
Ig-like domain-containing protein.
   
0.893
LOC101090771
Ig-like domain-containing protein; Belongs to the MHC class II family.
  
 
0.891
LOC101082653
Ig-like domain-containing protein.
   
0.865
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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